Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm23979-201ENSMUST00000104071 128 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm12193-201ENSMUST00000117250 379 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm13141-201ENSMUST00000117417 456 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm14865-201ENSMUST00000117523 494 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm12740-201ENSMUST00000118794 308 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm14251-201ENSMUST00000122133 279 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 BC064078-201ENSMUST00000122939 570 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm8121-201ENSMUST00000153583 499 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm7316-201ENSMUST00000165395 445 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm4613-201ENSMUST00000165488 276 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm28952-201ENSMUST00000189285 681 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm5660-201ENSMUST00000197453 1149 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm43406-201ENSMUST00000200356 334 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm17893-201ENSMUST00000203017 770 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm18557-201ENSMUST00000218710 433 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 AC131745.1-201ENSMUST00000223660 330 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gm24924-201ENSMUST00000084007 164 ntBASIC8.9□□□□□ -0.98
Clcn1Q64347 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Clcn1Q64347 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Clcn1Q64347 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.9□□□□□ -0.99
Clcn1Q64347 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Clcn1Q64347 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Clcn1Q64347 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.9□□□□□ -0.99
Clcn1Q64347 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC8.9□□□□□ -0.99
Clcn1Q64347 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Clcn1Q64347 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Clcn1Q64347 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.9□□□□□ -0.99
Clcn1Q64347 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm38062-201ENSMUST00000192541 1856 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Clcn1Q64347 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm24273-201ENSMUST00000102332 164 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm2348-201ENSMUST00000108782 300 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm14772-201ENSMUST00000116562 514 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm23653-201ENSMUST00000116751 97 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm11501-201ENSMUST00000118039 581 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm15142-201ENSMUST00000121013 856 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm12369-201ENSMUST00000121343 942 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm15242-201ENSMUST00000122459 283 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm6058-201ENSMUST00000154261 399 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm24741-201ENSMUST00000158857 106 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm23968-201ENSMUST00000175047 125 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm45432-201ENSMUST00000210391 416 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 CT030135.1-201ENSMUST00000223760 570 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Clcn1Q64347 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Clcn1Q64347 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Clcn1Q64347 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Clcn1Q64347 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC8.89□□□□□ -0.99
Clcn1Q64347 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.89□□□□□ -0.99
Clcn1Q64347 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Clcn1Q64347 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Clcn1Q64347 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Clcn1Q64347 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Clcn1Q64347 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Clcn1Q64347 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Clcn1Q64347 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.88□□□□□ -0.99
Clcn1Q64347 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Clcn1Q64347 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Clcn1Q64347 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms