Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm45850-201ENSMUST00000212536 338 ntBASIC5.28□□□□□ -1.56
Cdh11P55288 Gm10688-201ENSMUST00000214985 520 ntBASIC5.28□□□□□ -1.56
Cdh11P55288 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.28□□□□□ -1.56
Cdh11P55288 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.28□□□□□ -1.56
Cdh11P55288 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdh11P55288 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdh11P55288 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh11P55288 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdh11P55288 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.28□□□□□ -1.56
Cdh11P55288 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh11P55288 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdh11P55288 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Cdh11P55288 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Cdh11P55288 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm8501-201ENSMUST00000117684 432 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm3931-201ENSMUST00000119038 455 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm14294-201ENSMUST00000119749 751 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm14805-201ENSMUST00000120172 340 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm12322-201ENSMUST00000121605 389 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm25013-201ENSMUST00000158402 128 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm7281-201ENSMUST00000160010 543 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm16269-201ENSMUST00000160532 409 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm20480-201ENSMUST00000173953 250 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm20453-201ENSMUST00000173968 226 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm8826-201ENSMUST00000193161 948 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh11P55288 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm43105-201ENSMUST00000202987 459 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm45078-201ENSMUST00000205343 546 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.27□□□□□ -1.57
Cdh11P55288 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm5229-201ENSMUST00000039375 354 ntBASIC5.27□□□□□ -1.57
Cdh11P55288 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdh11P55288 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdh11P55288 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdh11P55288 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Cdh11P55288 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdh11P55288 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.26□□□□□ -1.57
Cdh11P55288 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdh11P55288 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdh11P55288 Mir700-201ENSMUST00000102169 79 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdh11P55288 Gm13428-201ENSMUST00000117540 365 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 Gm15332-201ENSMUST00000118386 357 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 Gm11227-201ENSMUST00000119774 471 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 Snora47-201ENSMUST00000157483 138 ntBASIC5.26□□□□□ -1.57
Cdh11P55288 Gm23050-201ENSMUST00000158775 165 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms