Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NcanP55066 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
NcanP55066 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NcanP55066 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.2□□□□□ -1.42
NcanP55066 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm25422-201ENSMUST00000104219 129 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm22493-201ENSMUST00000104494 132 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
NcanP55066 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Gm12641-201ENSMUST00000117874 985 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm14472-201ENSMUST00000119815 282 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm12466-201ENSMUST00000121199 620 ntBASIC6.2□□□□□ -1.42
NcanP55066 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Gm24369-201ENSMUST00000175387 96 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm26607-201ENSMUST00000180661 867 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Gm5735-201ENSMUST00000207053 167 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm3257-201ENSMUST00000207217 675 ntBASIC6.2□□□□□ -1.42
NcanP55066 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.2□□□□□ -1.42
NcanP55066 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.2□□□□□ -1.42
NcanP55066 Gm18247-201ENSMUST00000222937 601 ntBASIC6.2□□□□□ -1.42
NcanP55066 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
NcanP55066 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NcanP55066 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NcanP55066 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NcanP55066 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NcanP55066 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.19□□□□□ -1.42
NcanP55066 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.19□□□□□ -1.42
NcanP55066 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
NcanP55066 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.19□□□□□ -1.42
NcanP55066 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Gm6382-201ENSMUST00000118873 942 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm6175-201ENSMUST00000121351 400 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm15428-201ENSMUST00000121352 333 ntBASIC6.19□□□□□ -1.42
NcanP55066 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Gm24239-201ENSMUST00000157791 255 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm24767-201ENSMUST00000158509 95 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NcanP55066 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm37341-201ENSMUST00000194680 371 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm6520-201ENSMUST00000200636 410 ntBASIC6.19□□□□□ -1.42
NcanP55066 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.19□□□□□ -1.42
NcanP55066 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
NcanP55066 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.19□□□□□ -1.42
NcanP55066 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NcanP55066 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NcanP55066 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NcanP55066 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NcanP55066 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.19□□□□□ -1.42
NcanP55066 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NcanP55066 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
NcanP55066 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.18□□□□□ -1.42
NcanP55066 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.18□□□□□ -1.42
NcanP55066 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.18□□□□□ -1.42
NcanP55066 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NcanP55066 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms