Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox3P53784 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm23948-201ENSMUST00000104030 132 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.53□□□□□ -1.52
Sox3P53784 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.53□□□□□ -1.52
Sox3P53784 Gm24295-201ENSMUST00000158298 131 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.53□□□□□ -1.52
Sox3P53784 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Sox3P53784 Gm37308-201ENSMUST00000194684 100 ntBASIC5.53□□□□□ -1.52
Sox3P53784 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Gm19900-201ENSMUST00000207285 576 ntBASIC5.53□□□□□ -1.52
Sox3P53784 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.53□□□□□ -1.52
Sox3P53784 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.53□□□□□ -1.52
Sox3P53784 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.53□□□□□ -1.52
Sox3P53784 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Sox3P53784 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox3P53784 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox3P53784 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox3P53784 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.53□□□□□ -1.52
Sox3P53784 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sox3P53784 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.53□□□□□ -1.52
Sox3P53784 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sox3P53784 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sox3P53784 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm15560-201ENSMUST00000117107 643 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm13493-201ENSMUST00000120318 493 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm12494-201ENSMUST00000121684 521 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm25439-201ENSMUST00000158280 131 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm26172-201ENSMUST00000158421 134 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Gm18969-201ENSMUST00000189423 730 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm17981-201ENSMUST00000191109 739 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm37838-201ENSMUST00000194464 312 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Gm43561-201ENSMUST00000199866 448 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Gm44837-201ENSMUST00000206863 717 ntBASIC5.52□□□□□ -1.53
Sox3P53784 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.52□□□□□ -1.53
Sox3P53784 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Clec2j-201ENSMUST00000032517 515 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sox3P53784 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sox3P53784 Gm23502-201ENSMUST00000083902 145 ntBASIC5.52□□□□□ -1.53
Sox3P53784 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms