Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sox6P40645 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sox6P40645 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Sox6P40645 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sox6P40645 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox6P40645 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sox6P40645 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.33□□□□□ -1.56
Sox6P40645 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox6P40645 Gm23739-201ENSMUST00000102295 108 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm12322-201ENSMUST00000121605 389 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox6P40645 Gm16260-201ENSMUST00000155141 304 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm23279-201ENSMUST00000157912 97 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm24179-201ENSMUST00000158925 127 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm22698-201ENSMUST00000175375 108 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm27762-201ENSMUST00000183417 109 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Mir7082-201ENSMUST00000183526 92 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm28527-201ENSMUST00000185210 297 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.33□□□□□ -1.56
Sox6P40645 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm6074-201ENSMUST00000193340 451 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm43392-201ENSMUST00000196560 434 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox6P40645 Gm19182-201ENSMUST00000207139 577 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm44623-201ENSMUST00000207934 434 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.33□□□□□ -1.56
Sox6P40645 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Gm36262-201ENSMUST00000223274 499 ntBASIC5.33□□□□□ -1.56
Sox6P40645 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox6P40645 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox6P40645 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox6P40645 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox6P40645 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox6P40645 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.33□□□□□ -1.56
Sox6P40645 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.33□□□□□ -1.56
Sox6P40645 AW046200-203ENSMUST00000211787 2479 ntBASIC5.33□□□□□ -1.56
Sox6P40645 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox6P40645 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox6P40645 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Sox6P40645 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox6P40645 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 Gm20486-201ENSMUST00000101544 128 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox6P40645 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 Gm11970-201ENSMUST00000116105 320 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm11902-201ENSMUST00000118849 270 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox6P40645 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox6P40645 Gm24741-201ENSMUST00000158857 106 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Olfr331-202ENSMUST00000170501 957 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Mir5128-201ENSMUST00000175217 84 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Gm10410-201ENSMUST00000180138 384 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm26898-201ENSMUST00000181678 384 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Mir6244-201ENSMUST00000184156 117 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.32□□□□□ -1.56
Sox6P40645 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Sox6P40645 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox6P40645 Gm18329-201ENSMUST00000215832 589 ntBASIC5.32□□□□□ -1.56
Sox6P40645 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox6P40645 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox6P40645 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.32□□□□□ -1.56
Sox6P40645 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.32□□□□□ -1.56
Sox6P40645 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox6P40645 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Olfr192-201ENSMUST00000080251 925 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox6P40645 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox6P40645 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox6P40645 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.32□□□□□ -1.56
Sox6P40645 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms