Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Foxa1P35582 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm23294-201ENSMUST00000104150 164 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm11270-201ENSMUST00000117685 471 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm15741-201ENSMUST00000119401 754 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm23233-201ENSMUST00000157301 137 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm24719-201ENSMUST00000157520 110 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm26372-201ENSMUST00000157831 236 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm38040-201ENSMUST00000193505 225 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm37308-201ENSMUST00000194684 100 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm4874-201ENSMUST00000203589 691 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm45750-201ENSMUST00000211966 354 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Foxa1P35582 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Foxa1P35582 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Foxa1P35582 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.2□□□□□ -1.58
Foxa1P35582 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Foxa1P35582 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Foxa1P35582 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Foxa1P35582 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm26078-201ENSMUST00000104067 128 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm11774-201ENSMUST00000118601 293 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm12482-201ENSMUST00000120435 630 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm15044-201ENSMUST00000120703 598 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm22916-201ENSMUST00000157616 119 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm24363-201ENSMUST00000158440 311 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm7152-201ENSMUST00000163570 605 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Mir3095-201ENSMUST00000175552 87 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Foxa1P35582 Gm6055-201ENSMUST00000180532 378 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm38181-201ENSMUST00000181357 720 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.19□□□□□ -1.58
Foxa1P35582 Mir7211-201ENSMUST00000184071 63 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm27855-201ENSMUST00000184122 128 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.19□□□□□ -1.58
Foxa1P35582 Gm7733-201ENSMUST00000199038 919 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms