Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Col2a1P28481 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Col2a1P28481 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm11833-201ENSMUST00000118393 853 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm12850-201ENSMUST00000119210 436 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm14520-201ENSMUST00000119258 387 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm13488-201ENSMUST00000120419 179 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm11894-201ENSMUST00000121579 328 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm26170-201ENSMUST00000158419 148 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm5139-201ENSMUST00000175943 249 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm25019-201ENSMUST00000179732 110 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Mir7087-201ENSMUST00000184840 70 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm29284-201ENSMUST00000188363 255 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm28061-201ENSMUST00000189085 807 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm7688-201ENSMUST00000212857 337 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.41□□□□□ -1.38
Col2a1P28481 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col2a1P28481 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm11561-201ENSMUST00000117429 417 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm7609-204ENSMUST00000161424 461 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm17223-201ENSMUST00000171413 481 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Col2a1P28481 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm44048-201ENSMUST00000204531 361 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18468-201ENSMUST00000207321 369 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18470-201ENSMUST00000207467 420 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18465-201ENSMUST00000207468 369 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18464-201ENSMUST00000207803 420 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18458-201ENSMUST00000207908 369 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18461-201ENSMUST00000208421 420 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm18205-201ENSMUST00000209215 841 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm2961-201ENSMUST00000211074 772 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.41□□□□□ -1.38
Col2a1P28481 Gm6362-201ENSMUST00000217686 836 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm6049-201ENSMUST00000222369 458 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm23459-201ENSMUST00000083259 131 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Mir188-201ENSMUST00000083464 68 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Mir449a-201ENSMUST00000083641 91 ntBASIC6.41□□□□□ -1.38
Col2a1P28481 Gm43130-201ENSMUST00000197721 3907 ntBASIC6.4□□□□□ -1.38
Col2a1P28481 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.4□□□□□ -1.38
Col2a1P28481 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Col2a1P28481 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.4□□□□□ -1.38
Col2a1P28481 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.4□□□□□ -1.38
Col2a1P28481 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col2a1P28481 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col2a1P28481 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col2a1P28481 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col2a1P28481 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.4□□□□□ -1.38
Col2a1P28481 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col2a1P28481 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col2a1P28481 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col2a1P28481 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm11805-201ENSMUST00000121238 600 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm3242-201ENSMUST00000171273 485 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col2a1P28481 Gm26970-201ENSMUST00000182990 964 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm27541-201ENSMUST00000184078 122 ntBASIC6.4□□□□□ -1.39
Col2a1P28481 Gm28683-201ENSMUST00000187134 615 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms