Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 CT030238.3-201ENSMUST00000227352 875 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.56□□□□□ -1.68
Sdc1P18828 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sdc1P18828 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.56□□□□□ -1.68
Sdc1P18828 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.55□□□□□ -1.68
Sdc1P18828 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Sdc1P18828 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 Serpina3h-202ENSMUST00000116393 1226 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm15493-201ENSMUST00000119461 528 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm11653-201ENSMUST00000119992 1009 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm14679-201ENSMUST00000121536 722 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm26350-201ENSMUST00000157531 288 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm7707-201ENSMUST00000165950 1156 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm5947-201ENSMUST00000179156 714 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm5645-201ENSMUST00000179597 714 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Sdc1P18828 Mir7033-201ENSMUST00000184259 81 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm18728-201ENSMUST00000186155 753 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm37784-201ENSMUST00000193233 189 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm37336-202ENSMUST00000193705 468 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm19007-201ENSMUST00000217746 874 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 AC122539.1-201ENSMUST00000219925 329 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm19095-201ENSMUST00000220533 730 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 AC165287.1-201ENSMUST00000224985 178 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 AC161877.2-201ENSMUST00000226248 545 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm6054-201ENSMUST00000078052 378 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm25134-201ENSMUST00000082646 160 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm43189-201ENSMUST00000196040 3069 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.55□□□□□ -1.68
Sdc1P18828 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.55□□□□□ -1.68
Sdc1P18828 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Sdc1P18828 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sdc1P18828 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Sdc1P18828 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
Sdc1P18828 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm14741-201ENSMUST00000120777 1009 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm13531-201ENSMUST00000121893 543 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm12540-201ENSMUST00000121938 319 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm24130-201ENSMUST00000158536 151 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm22533-201ENSMUST00000158821 274 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Sdc1P18828 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC4.54□□□□□ -1.68
Sdc1P18828 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sdc1P18828 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC4.54□□□□□ -1.68
Sdc1P18828 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms