Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.63□□□□□ -1.35
Col1a1P11087 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm24160-201ENSMUST00000104594 126 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm24735-201ENSMUST00000158859 118 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm8480-201ENSMUST00000190350 698 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Gm9238-201ENSMUST00000196181 329 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Gm43157-201ENSMUST00000198223 412 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Supt4b-201ENSMUST00000214434 351 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm4963-201ENSMUST00000072718 378 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Col1a1P11087 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
Col1a1P11087 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col1a1P11087 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.62□□□□□ -1.35
Col1a1P11087 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col1a1P11087 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.62□□□□□ -1.35
Col1a1P11087 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Cmah-208ENSMUST00000224819 9482 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Gm11759-201ENSMUST00000121742 464 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm10784-201ENSMUST00000178715 238 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.61□□□□□ -1.35
Col1a1P11087 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm44580-201ENSMUST00000206333 877 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm21041-201ENSMUST00000214829 823 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Gm18247-201ENSMUST00000222937 601 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col1a1P11087 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col1a1P11087 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.61□□□□□ -1.35
Col1a1P11087 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.61□□□□□ -1.35
Col1a1P11087 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm14769-201ENSMUST00000118590 432 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm15971-201ENSMUST00000119372 211 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm12094-201ENSMUST00000121781 472 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm26310-201ENSMUST00000157766 117 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr331-202ENSMUST00000170501 957 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.6□□□□□ -1.35
Col1a1P11087 Mir8097-201ENSMUST00000185150 119 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm2914-201ENSMUST00000186120 328 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.6□□□□□ -1.35
Col1a1P11087 Gm37882-201ENSMUST00000195254 196 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm45215-201ENSMUST00000206407 395 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.6□□□□□ -1.35
Col1a1P11087 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.6□□□□□ -1.35
Col1a1P11087 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms