Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 AC158388.2-201ENSMUST00000223665 1314 ntBASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 AC113059.1-201ENSMUST00000181185 2777 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx1-1G3UXB3 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm42537-201ENSMUST00000198260 2574 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Rbm43-206ENSMUST00000165313 1975 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Thrap3-203ENSMUST00000106142 2744 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Brip1os-202ENSMUST00000143819 2604 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Ddx1-201ENSMUST00000071103 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Mir669e-201ENSMUST00000117003 119 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm8534-201ENSMUST00000118553 766 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm14940-201ENSMUST00000119309 495 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm12244-201ENSMUST00000119500 291 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm24893-201ENSMUST00000122745 369 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm12833-201ENSMUST00000136112 477 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm22224-201ENSMUST00000157357 93 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm23538-201ENSMUST00000157535 101 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm16026-205ENSMUST00000162923 641 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm14527-201ENSMUST00000179300 639 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm25235-201ENSMUST00000179933 107 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm28283-201ENSMUST00000185509 178 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm38053-201ENSMUST00000193938 160 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm44657-201ENSMUST00000208568 450 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm17737-201ENSMUST00000210183 1147 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm10237-201ENSMUST00000078393 273 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Mir135b-201ENSMUST00000083501 97 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 AC124572.1-201ENSMUST00000218155 2406 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Lancl1-201ENSMUST00000027149 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Gm8675-201ENSMUST00000201408 1856 ntBASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nkx1-1G3UXB3 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nkx1-1G3UXB3 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nkx1-1G3UXB3 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Nkx1-1G3UXB3 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Nkx1-1G3UXB3 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Plekhs1-202ENSMUST00000178590 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Plekhs1-201ENSMUST00000039666 2378 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm25538-201ENSMUST00000101943 107 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm14038-201ENSMUST00000121500 807 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm12451-201ENSMUST00000121636 633 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm17359-201ENSMUST00000164216 778 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm21232-201ENSMUST00000182187 1006 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm7838-201ENSMUST00000203221 1189 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm45213-201ENSMUST00000206065 304 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm45105-201ENSMUST00000207824 397 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 AC129537.1-202ENSMUST00000226619 430 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm25133-201ENSMUST00000082647 130 ntBASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Bhlhe40-201ENSMUST00000032194 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nkx1-1G3UXB3 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms