Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm44971-201ENSMUST00000206192 337 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm45100-201ENSMUST00000209153 391 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm45506-201ENSMUST00000211620 280 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm23846-201ENSMUST00000083835 107 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm26002-201ENSMUST00000101915 107 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm23323-201ENSMUST00000104471 133 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm22152-201ENSMUST00000116966 125 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm12370-201ENSMUST00000117809 604 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm16056-201ENSMUST00000119293 135 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm5793-201ENSMUST00000119393 630 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm10086-201ENSMUST00000136334 354 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm22491-201ENSMUST00000157190 102 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm17030-201ENSMUST00000167016 393 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm7393-201ENSMUST00000172650 739 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm10074-201ENSMUST00000174543 249 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Snord116l12-201ENSMUST00000179816 94 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm29064-201ENSMUST00000187014 813 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm8403-201ENSMUST00000189712 1298 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm37828-201ENSMUST00000192496 432 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm38097-201ENSMUST00000192936 439 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm42465-201ENSMUST00000197036 492 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm17834-201ENSMUST00000204322 891 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm4270-201ENSMUST00000209666 406 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm18860-201ENSMUST00000212029 764 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 AC109172.2-201ENSMUST00000228792 381 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm24046-201ENSMUST00000083111 165 ntBASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
Trim39Q9ESN2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms