Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm25550-201ENSMUST00000158079 128 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm6673-201ENSMUST00000166114 700 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm20615-201ENSMUST00000177503 705 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm27538-201ENSMUST00000185065 294 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm28094-201ENSMUST00000185262 390 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm7266-201ENSMUST00000187999 405 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm37135-201ENSMUST00000192652 534 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm9173-201ENSMUST00000198054 400 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm7492-201ENSMUST00000201745 725 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm2040-201ENSMUST00000202979 289 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm18597-201ENSMUST00000209519 694 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 AC079644.1-201ENSMUST00000220586 405 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm9315-201ENSMUST00000222696 908 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 AC158521.1-201ENSMUST00000225295 660 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm43921-201ENSMUST00000204296 1792 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.25□□□□□ -1.25
Clp1Q99LI9 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Clp1Q99LI9 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm15108-201ENSMUST00000116160 803 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm22091-201ENSMUST00000116908 127 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm23824-201ENSMUST00000158741 276 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm20432-201ENSMUST00000173716 250 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm17048-201ENSMUST00000179266 847 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm6931-201ENSMUST00000183103 371 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm42622-201ENSMUST00000197229 355 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Mir142-201ENSMUST00000198092 64 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm43212-201ENSMUST00000198208 394 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm43233-201ENSMUST00000200491 616 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm43578-201ENSMUST00000201250 459 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clp1Q99LI9 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm18600-201ENSMUST00000207205 505 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm5324-201ENSMUST00000208115 476 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 AC141642.1-201ENSMUST00000220598 229 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.24□□□□□ -1.25
Clp1Q99LI9 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 AC168062.2-201ENSMUST00000228907 422 ntBASIC7.24□□□□□ -1.25
Clp1Q99LI9 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms