Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm15490-201ENSMUST00000119894 387 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm13338-201ENSMUST00000120235 361 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm12854-201ENSMUST00000128518 297 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm15812-201ENSMUST00000162331 748 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm7665-201ENSMUST00000076710 297 ntBASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col6a6Q8C6K9 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm11972-201ENSMUST00000118514 389 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 H3f3c-201ENSMUST00000119459 411 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm14515-201ENSMUST00000121327 216 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm15152-201ENSMUST00000121540 394 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Clec2j-202ENSMUST00000203658 606 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm18259-201ENSMUST00000220991 2010 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm37040-201ENSMUST00000191740 1824 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm6175-201ENSMUST00000121351 400 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm23872-201ENSMUST00000175432 77 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm9320-201ENSMUST00000184151 473 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Mir7687-201ENSMUST00000184722 59 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm18427-201ENSMUST00000195422 515 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm42720-201ENSMUST00000196813 300 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Gm9386-201ENSMUST00000095195 381 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a6Q8C6K9 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Col6a6Q8C6K9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Col6a6Q8C6K9 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.09□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.6
Col6a6Q8C6K9 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm26950-201ENSMUST00000182734 498 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm29474-201ENSMUST00000187688 379 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm23011-202ENSMUST00000197855 275 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Col6a6Q8C6K9 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms