Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm28344-201ENSMUST00000185704 279 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Iglc4-201ENSMUST00000197046 314 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm43855-201ENSMUST00000197462 507 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm3549-201ENSMUST00000203873 794 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Chn2-211ENSMUST00000203941 687 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm45207-201ENSMUST00000207469 145 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 AC131710.2-201ENSMUST00000226773 683 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm26497-201ENSMUST00000083146 107 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Rnf122-201ENSMUST00000046941 3582 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Klhl28-201ENSMUST00000021331 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 Gm9430-201ENSMUST00000121232 1527 ntBASIC8.75□□□□□ -1.01
Trim35Q8C006 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim35Q8C006 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim35Q8C006 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm43025-201ENSMUST00000201764 1886 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Lepr-202ENSMUST00000102777 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm44078-201ENSMUST00000204652 2646 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Prune2-207ENSMUST00000225351 2115 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm42662-201ENSMUST00000202539 1431 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm8173-201ENSMUST00000186797 1977 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 AC101945.4-201ENSMUST00000228464 1976 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm23691-201ENSMUST00000101878 107 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Rhox3a-201ENSMUST00000115203 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm22033-201ENSMUST00000116947 90 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm15981-201ENSMUST00000119196 457 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm13729-201ENSMUST00000120328 406 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm14129-201ENSMUST00000122436 291 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm16356-201ENSMUST00000143300 169 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm6483-201ENSMUST00000155660 862 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm24501-201ENSMUST00000158452 62 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm25654-201ENSMUST00000158467 88 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Crb1-ps-201ENSMUST00000160441 895 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm2564-201ENSMUST00000166898 707 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm17153-201ENSMUST00000171314 490 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm24812-201ENSMUST00000175315 284 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm24325-201ENSMUST00000175344 74 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm29227-201ENSMUST00000187139 315 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm29034-201ENSMUST00000188099 315 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm1833-201ENSMUST00000191608 682 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm18964-201ENSMUST00000193013 563 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm37757-201ENSMUST00000193072 210 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm37129-201ENSMUST00000195791 315 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm42539-201ENSMUST00000197009 308 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 AL669916.5-201ENSMUST00000214874 361 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 AC156164.1-201ENSMUST00000216958 225 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm19056-201ENSMUST00000218220 797 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 AC113031.1-201ENSMUST00000227400 432 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Tonsl-201ENSMUST00000078803 885 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm25704-201ENSMUST00000083116 168 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm23845-201ENSMUST00000083834 152 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm43917-201ENSMUST00000191984 2360 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm42847-201ENSMUST00000201732 2553 ntBASIC8.74□□□□□ -1.01
Trim35Q8C006 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm10644-201ENSMUST00000098595 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Psg19-203ENSMUST00000182853 1518 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Trim35Q8C006 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Trim35Q8C006 Numb-207ENSMUST00000129335 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 AC115744.1-201ENSMUST00000222398 2379 ntBASIC8.73□□□□□ -1.01
Trim35Q8C006 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Trim35Q8C006 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Trim35Q8C006 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms