Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm14769-201ENSMUST00000118590 432 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm9005-201ENSMUST00000119908 607 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm12222-201ENSMUST00000121368 260 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm11341-201ENSMUST00000122316 447 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm3344-201ENSMUST00000169610 603 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm24561-201ENSMUST00000175182 95 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Mir6992-201ENSMUST00000183342 109 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm29161-201ENSMUST00000188250 699 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm29201-201ENSMUST00000189120 431 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm28586-201ENSMUST00000189857 456 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm45724-201ENSMUST00000213031 420 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm8256-203ENSMUST00000228692 591 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm24454-201ENSMUST00000083349 132 ntBASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ccdc40Q8BI79 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm12931-201ENSMUST00000117046 324 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm12683-201ENSMUST00000117528 415 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm14970-201ENSMUST00000122289 355 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm23964-201ENSMUST00000157966 107 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm25013-201ENSMUST00000158402 128 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm29519-201ENSMUST00000186994 398 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm44108-201ENSMUST00000203525 422 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm18689-201ENSMUST00000203969 902 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm2099-201ENSMUST00000220979 412 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm24200-201ENSMUST00000082955 157 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ccdc40Q8BI79 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms