Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.41□□□□□ -1.7
NipblQ6KCD5 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC4.41□□□□□ -1.7
NipblQ6KCD5 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NipblQ6KCD5 Gm4963-201ENSMUST00000072718 378 ntBASIC4.41□□□□□ -1.7
NipblQ6KCD5 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NipblQ6KCD5 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm18632-201ENSMUST00000222597 2087 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm13973-201ENSMUST00000121371 894 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm4321-201ENSMUST00000200520 442 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm44539-201ENSMUST00000206010 238 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.4□□□□□ -1.7
NipblQ6KCD5 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm22807-201ENSMUST00000082737 129 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.4□□□□□ -1.7
NipblQ6KCD5 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NipblQ6KCD5 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm37206-201ENSMUST00000195512 3069 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm12328-201ENSMUST00000118611 197 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Fam26d-202ENSMUST00000218239 3075 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 CT009757.5-201ENSMUST00000221858 3425 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
NipblQ6KCD5 AC153971.1-201ENSMUST00000215097 3811 ntBASIC4.4□□□□□ -1.71
NipblQ6KCD5 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NipblQ6KCD5 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm15490-201ENSMUST00000119894 387 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm23391-201ENSMUST00000157579 104 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm15970-201ENSMUST00000160623 834 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm26318-201ENSMUST00000176507 96 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm29086-201ENSMUST00000186774 222 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm43078-201ENSMUST00000197222 168 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm6366-201ENSMUST00000198766 826 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Gm232-201ENSMUST00000216549 2559 ntBASIC4.39□□□□□ -1.71
NipblQ6KCD5 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NipblQ6KCD5 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms