Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm2367-201ENSMUST00000192374 472 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm17988-201ENSMUST00000208796 535 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Snora44-201ENSMUST00000082670 129 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm13991-201ENSMUST00000120190 648 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm6175-201ENSMUST00000121351 400 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm12732-201ENSMUST00000121688 180 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm24363-201ENSMUST00000158440 311 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm7152-201ENSMUST00000163570 605 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Mir6921-201ENSMUST00000183719 80 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm44463-201ENSMUST00000198895 137 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm19880-201ENSMUST00000207731 318 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm44571-201ENSMUST00000208092 533 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm18205-201ENSMUST00000209215 841 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm10540-201ENSMUST00000097581 276 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Upf3bQ3ULL6 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm11908-201ENSMUST00000117755 347 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm12850-201ENSMUST00000119210 436 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm12482-201ENSMUST00000120435 630 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Mir7211-201ENSMUST00000184071 63 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm17952-201ENSMUST00000193914 747 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm37308-201ENSMUST00000194684 100 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Gm45405-201ENSMUST00000211544 609 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.03□□□□□ -1.44
Upf3bQ3ULL6 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms