Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.08□□□□□ -1.6
H3f3aP84244 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3f3aP84244 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
H3f3aP84244 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3f3aP84244 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3f3aP84244 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
H3f3aP84244 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm11774-201ENSMUST00000118601 293 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm6427-201ENSMUST00000118721 979 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm7309-201ENSMUST00000121670 581 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm12732-201ENSMUST00000121688 180 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm22959-201ENSMUST00000122514 303 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm24692-201ENSMUST00000157761 146 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm25445-201ENSMUST00000158996 299 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm18343-201ENSMUST00000172802 604 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm37203-201ENSMUST00000191618 385 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm2367-201ENSMUST00000192374 472 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm17952-201ENSMUST00000193914 747 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Gm9278-201ENSMUST00000205508 553 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm7990-201ENSMUST00000212126 593 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.07□□□□□ -1.6
H3f3aP84244 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3f3aP84244 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
H3f3aP84244 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3f3aP84244 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3f3aP84244 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
H3f3aP84244 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
H3f3aP84244 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3f3aP84244 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.07□□□□□ -1.6
H3f3aP84244 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
H3f3aP84244 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
H3f3aP84244 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.06□□□□□ -1.6
H3f3aP84244 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
H3f3aP84244 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3f3aP84244 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
H3f3aP84244 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm11270-201ENSMUST00000117685 471 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm12677-201ENSMUST00000118668 426 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm13679-201ENSMUST00000118678 484 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm11533-201ENSMUST00000120287 477 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm13593-201ENSMUST00000121329 692 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm9428-201ENSMUST00000127214 769 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm24731-201ENSMUST00000158227 131 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm8032-201ENSMUST00000171009 574 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm4832-201ENSMUST00000182679 399 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Mir7211-201ENSMUST00000184071 63 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm28195-201ENSMUST00000186992 372 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm18702-201ENSMUST00000196923 588 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
H3f3aP84244 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm44571-201ENSMUST00000208092 533 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.06□□□□□ -1.6
H3f3aP84244 Gm10709-201ENSMUST00000213318 480 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3f3aP84244 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3f3aP84244 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
H3f3aP84244 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
H3f3aP84244 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.06□□□□□ -1.6
H3f3aP84244 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms