Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Tpm1P58771 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Gm25013-201ENSMUST00000158402 128 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Gm23027-201ENSMUST00000158771 158 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.2□□□□□ -1.42
Tpm1P58771 Mir7005-201ENSMUST00000185089 69 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Gm38122-201ENSMUST00000192679 885 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.2□□□□□ -1.42
Tpm1P58771 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.2□□□□□ -1.42
Tpm1P58771 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.2□□□□□ -1.42
Tpm1P58771 Gm5055-201ENSMUST00000215697 581 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.2□□□□□ -1.42
Tpm1P58771 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Gm7042-201ENSMUST00000223027 384 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Tpm1P58771 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Tpm1P58771 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.2□□□□□ -1.42
Tpm1P58771 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Tpm1P58771 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Tpm1P58771 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm23233-201ENSMUST00000157301 137 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm22916-201ENSMUST00000157616 119 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm23964-201ENSMUST00000157966 107 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm25989-201ENSMUST00000158761 133 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Tpm1P58771 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm22690-201ENSMUST00000175054 110 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm27782-201ENSMUST00000185059 199 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Tpm1P58771 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.19□□□□□ -1.42
Tpm1P58771 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Tpm1P58771 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Tpm1P58771 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Tpm1P58771 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.18□□□□□ -1.42
Tpm1P58771 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.18□□□□□ -1.42
Tpm1P58771 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms