Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Gm13193-201ENSMUST00000117275 225 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm14175-201ENSMUST00000119835 241 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm15480-201ENSMUST00000120442 519 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm14998-201ENSMUST00000120502 495 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm24685-201ENSMUST00000157764 285 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm17046-201ENSMUST00000168078 850 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 Mir7687-201ENSMUST00000184722 59 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm28188-201ENSMUST00000190483 236 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm44456-201ENSMUST00000196554 89 ntBASIC5.55□□□□□ -1.52
Sox3P53784 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.55□□□□□ -1.52
Sox3P53784 Gm43631-201ENSMUST00000202011 369 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm44108-201ENSMUST00000203525 422 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm45628-201ENSMUST00000210849 274 ntBASIC5.55□□□□□ -1.52
Sox3P53784 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.55□□□□□ -1.52
Sox3P53784 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Gm5229-201ENSMUST00000039375 354 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox3P53784 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.55□□□□□ -1.52
Sox3P53784 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.55□□□□□ -1.52
Sox3P53784 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox3P53784 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Sox3P53784 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox3P53784 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm22778-201ENSMUST00000104090 128 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm24855-201ENSMUST00000104848 97 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm14098-201ENSMUST00000119295 623 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm6744-201ENSMUST00000119303 543 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm14331-201ENSMUST00000120396 409 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm14587-201ENSMUST00000121714 658 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm5353-201ENSMUST00000139800 793 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Mir7056-201ENSMUST00000183776 59 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm9320-201ENSMUST00000184151 473 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm8480-201ENSMUST00000190350 698 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm38015-201ENSMUST00000193048 188 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm9238-201ENSMUST00000196181 329 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm42581-201ENSMUST00000201774 966 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.54□□□□□ -1.52
Sox3P53784 Gm45082-201ENSMUST00000206082 601 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.54□□□□□ -1.52
Sox3P53784 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sox3P53784 Gm19786-201ENSMUST00000222589 580 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.54□□□□□ -1.52
Sox3P53784 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.54□□□□□ -1.52
Sox3P53784 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.54□□□□□ -1.52
Sox3P53784 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sox3P53784 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms