Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx1P18111 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm21803-201ENSMUST00000188897 693 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx1P18111 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Igkv4-73-201ENSMUST00000199760 358 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm7554-201ENSMUST00000202282 574 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm44003-201ENSMUST00000203024 490 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx1P18111 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.78□□□□□ -1.64
Cdx1P18111 AC153557.1-201ENSMUST00000217697 403 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 AC104906.1-201ENSMUST00000218122 913 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 AC154219.1-201ENSMUST00000220764 1262 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx1P18111 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx1P18111 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx1P18111 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx1P18111 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Cdx1P18111 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Cdx1P18111 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.77□□□□□ -1.65
Cdx1P18111 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdx1P18111 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Cdx1P18111 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm16394-201ENSMUST00000117289 675 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdx1P18111 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm26354-201ENSMUST00000158221 129 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdx1P18111 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm23631-201ENSMUST00000175291 123 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm18700-201ENSMUST00000185791 553 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm37809-201ENSMUST00000195050 931 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm7270-201ENSMUST00000195818 1128 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm44361-201ENSMUST00000197960 94 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm44163-201ENSMUST00000205140 475 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm18600-201ENSMUST00000207205 505 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm18329-201ENSMUST00000215832 589 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm18997-201ENSMUST00000216353 822 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdx1P18111 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Cdx1P18111 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Cdx1P18111 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Cdx1P18111 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Cdx1P18111 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.77□□□□□ -1.65
Cdx1P18111 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms