Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col1a1P11087 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col1a1P11087 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col1a1P11087 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.66□□□□□ -1.34
Col1a1P11087 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Col1a1P11087 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col1a1P11087 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col1a1P11087 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Col1a1P11087 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.65□□□□□ -1.34
Col1a1P11087 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col1a1P11087 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.65□□□□□ -1.34
Col1a1P11087 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.65□□□□□ -1.34
Col1a1P11087 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col1a1P11087 AC122881.1-201ENSMUST00000225757 2695 ntBASIC6.65□□□□□ -1.34
Col1a1P11087 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.65□□□□□ -1.34
Col1a1P11087 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Col1a1P11087 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Col1a1P11087 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.65□□□□□ -1.35
Col1a1P11087 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Gm15840-201ENSMUST00000122099 943 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm15171-201ENSMUST00000122191 334 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Gm3170-201ENSMUST00000168753 850 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm3348-201ENSMUST00000177813 850 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Gm43467-201ENSMUST00000197441 437 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.65□□□□□ -1.35
Col1a1P11087 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm45700-201ENSMUST00000205866 347 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Col1a1P11087 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Col1a1P11087 Gm18541-201ENSMUST00000215935 538 ntBASIC6.65□□□□□ -1.35
Col1a1P11087 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.65□□□□□ -1.35
Col1a1P11087 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.65□□□□□ -1.35
Col1a1P11087 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col1a1P11087 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.65□□□□□ -1.35
Col1a1P11087 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Col1a1P11087 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.65□□□□□ -1.35
Col1a1P11087 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.64□□□□□ -1.35
Col1a1P11087 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.64□□□□□ -1.35
Col1a1P11087 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Col1a1P11087 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Gm12444-201ENSMUST00000121512 877 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Gm25293-201ENSMUST00000122792 285 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Gm23327-201ENSMUST00000157420 78 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Mir6400-201ENSMUST00000184870 92 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
Col1a1P11087 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col1a1P11087 Gm19880-201ENSMUST00000207731 318 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col1a1P11087 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.64□□□□□ -1.35
Col1a1P11087 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col1a1P11087 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col1a1P11087 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col1a1P11087 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col1a1P11087 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col1a1P11087 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col1a1P11087 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Gm24429-201ENSMUST00000104076 132 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col1a1P11087 Gm26595-201ENSMUST00000181585 484 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gm29240-201ENSMUST00000187248 286 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gm7688-201ENSMUST00000212857 337 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Col1a1P11087 Gm23511-201ENSMUST00000083084 164 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gm22741-201ENSMUST00000083438 165 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col1a1P11087 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col1a1P11087 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.63□□□□□ -1.35
Col1a1P11087 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.63□□□□□ -1.35
Col1a1P11087 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms