Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm43043-201ENSMUST00000196579 412 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC5.95□□□□□ -1.46
Hoxd3P09027 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm8106-201ENSMUST00000213123 523 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm33778-201ENSMUST00000216884 704 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm3266-201ENSMUST00000217832 591 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 AC155298.3-201ENSMUST00000225307 3220 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm10123-201ENSMUST00000075723 490 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm38386-201ENSMUST00000194293 3421 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 AC158686.1-201ENSMUST00000218068 2332 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm13821-201ENSMUST00000202029 3201 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 AC154347.1-201ENSMUST00000221358 3105 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm24284-201ENSMUST00000104240 142 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm22927-201ENSMUST00000104268 131 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm24986-201ENSMUST00000104452 132 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm23988-201ENSMUST00000117034 122 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm12024-201ENSMUST00000118819 1253 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm7363-201ENSMUST00000119883 399 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm11498-201ENSMUST00000120660 949 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm11383-201ENSMUST00000121346 807 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm24530-201ENSMUST00000157948 288 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm22687-201ENSMUST00000158301 105 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm16580-201ENSMUST00000162696 1044 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.94□□□□□ -1.46
Hoxd3P09027 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm21181-201ENSMUST00000186249 330 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm3121-201ENSMUST00000187086 406 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29355-201ENSMUST00000188178 697 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm28953-201ENSMUST00000188336 697 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm28061-201ENSMUST00000189085 807 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29376-201ENSMUST00000189357 835 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29332-201ENSMUST00000190829 227 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm37455-201ENSMUST00000191993 529 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Mir3970-201ENSMUST00000199287 90 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm5176-202ENSMUST00000220267 583 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm2754-201ENSMUST00000223383 589 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Hoxd3P09027 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Gm22423-201ENSMUST00000082861 184 ntBASIC5.94□□□□□ -1.46
Hoxd3P09027 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Hoxd3P09027 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms