Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Gm17086-201ENSMUST00000171346 484 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Gm26731-201ENSMUST00000180683 543 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Gm44048-201ENSMUST00000204531 361 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Gm17984-201ENSMUST00000205286 859 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 AC165953.1-201ENSMUST00000226386 357 ntBASIC10.38□□□□□ -0.75
Ccdc180J3QNE4 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Gm23537-201ENSMUST00000157536 330 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Gm24103-201ENSMUST00000174930 77 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Gm42776-201ENSMUST00000198031 406 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Gm23511-201ENSMUST00000083084 164 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Gm22741-201ENSMUST00000083438 165 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Mir342-201ENSMUST00000083502 99 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Ccdc180J3QNE4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Cmah-208ENSMUST00000224819 9482 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm26984-201ENSMUST00000182345 3510 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm12287-201ENSMUST00000119770 707 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm25389-201ENSMUST00000157340 286 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm20545-201ENSMUST00000174739 210 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm2950-201ENSMUST00000185530 520 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm7496-201ENSMUST00000192573 1034 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm19739-201ENSMUST00000195941 153 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm9685-201ENSMUST00000211275 538 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm37773-201ENSMUST00000194141 2120 ntBASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc180J3QNE4 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Gm11617-201ENSMUST00000119609 639 ntBASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Gm16060-201ENSMUST00000153140 478 ntBASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Gm27148-201ENSMUST00000185086 160 ntBASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 AC153943.1-201ENSMUST00000219312 256 ntBASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccdc180J3QNE4 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Gm13738-201ENSMUST00000122437 469 ntBASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Gm21041-201ENSMUST00000214829 823 ntBASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccdc180J3QNE4 Gm43768-201ENSMUST00000198380 1258 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms