Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AW822073-201ENSMUST00000075305 555 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm25311-201ENSMUST00000104136 132 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm13806-201ENSMUST00000117822 325 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm15021-201ENSMUST00000117832 742 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm13679-201ENSMUST00000118678 484 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm15854-201ENSMUST00000118879 808 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm15187-201ENSMUST00000122329 264 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm24724-201ENSMUST00000158230 107 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm23505-201ENSMUST00000158989 130 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm3339-201ENSMUST00000163462 475 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Mir8114-201ENSMUST00000183582 111 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm19480-201ENSMUST00000185547 667 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm28997-201ENSMUST00000188759 429 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm35323-201ENSMUST00000191836 499 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm38291-201ENSMUST00000193671 259 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm42804-201ENSMUST00000199701 178 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm8539-201ENSMUST00000199822 501 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm29817-201ENSMUST00000210098 172 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm18940-201ENSMUST00000222518 871 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm10540-201ENSMUST00000097581 276 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.93□□□□□ -1.46
Pcdh1F7BJK1 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms