Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm12344-201ENSMUST00000117087 329 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm7058-201ENSMUST00000119209 902 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm15452-201ENSMUST00000119877 240 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm12104-201ENSMUST00000120359 979 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm8722-201ENSMUST00000121466 769 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm24011-201ENSMUST00000157732 268 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm23760-201ENSMUST00000158350 116 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Mir3072-201ENSMUST00000175610 83 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm21737-201ENSMUST00000178112 664 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm20874-201ENSMUST00000178356 663 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm21744-201ENSMUST00000178403 662 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm20901-201ENSMUST00000180177 664 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm26587-201ENSMUST00000180795 989 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm9167-201ENSMUST00000182469 962 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm6931-201ENSMUST00000183103 371 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm28843-201ENSMUST00000189198 678 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm28090-201ENSMUST00000189458 664 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm21647-201ENSMUST00000189755 664 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm28164-201ENSMUST00000190143 442 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm29546-201ENSMUST00000191171 678 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm44356-201ENSMUST00000196731 111 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm43226-201ENSMUST00000202438 259 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm7986-201ENSMUST00000221336 551 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm6419-201ENSMUST00000097166 429 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim39Q9ESN2 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm23485-201ENSMUST00000104181 155 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm11558-201ENSMUST00000118454 459 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm14769-201ENSMUST00000118590 432 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm5601-201ENSMUST00000118909 972 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm6664-201ENSMUST00000119138 468 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm12578-201ENSMUST00000121244 417 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm11688-201ENSMUST00000122145 308 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Mir3078-201ENSMUST00000175231 87 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm37719-201ENSMUST00000194615 292 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim39Q9ESN2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm20128-201ENSMUST00000196189 417 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm42924-201ENSMUST00000197261 185 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm4742-201ENSMUST00000200261 771 ntBASIC6.67□□□□□ -1.34
Trim39Q9ESN2 Gm7890-201ENSMUST00000204877 601 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms