Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.97□□□□□ -1.45
Rpa3Q9CQ71 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Rpa3Q9CQ71 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Rpa3Q9CQ71 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Rpa3Q9CQ71 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Rpa3Q9CQ71 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.97□□□□□ -1.45
Rpa3Q9CQ71 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Rpa3Q9CQ71 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Rpa3Q9CQ71 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm11561-201ENSMUST00000117429 417 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm22959-201ENSMUST00000122514 303 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm24383-201ENSMUST00000122691 333 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Mir7072-201ENSMUST00000184542 60 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm37235-201ENSMUST00000195171 59 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm43148-201ENSMUST00000198237 520 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm18205-201ENSMUST00000209215 841 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm45485-201ENSMUST00000211229 357 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm18789-201ENSMUST00000216115 550 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm10221-201ENSMUST00000088299 309 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rpa3Q9CQ71 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm23294-201ENSMUST00000104150 164 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm11270-201ENSMUST00000117685 471 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm15741-201ENSMUST00000119401 754 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm15959-201ENSMUST00000121724 368 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm25459-201ENSMUST00000157953 114 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm24363-201ENSMUST00000158440 311 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm17952-201ENSMUST00000193914 747 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm37308-201ENSMUST00000194684 100 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm19880-201ENSMUST00000207731 318 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Gm4510-201ENSMUST00000218265 427 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rpa3Q9CQ71 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms