Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Use1Q9CQ56 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.39□□□□□ -1.55
Use1Q9CQ56 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Use1Q9CQ56 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.39□□□□□ -1.55
Use1Q9CQ56 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm13156-201ENSMUST00000118348 321 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm12451-201ENSMUST00000121636 633 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm13669-201ENSMUST00000122366 457 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm24236-201ENSMUST00000157794 134 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm26353-201ENSMUST00000158224 255 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm22160-201ENSMUST00000158405 328 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm22428-201ENSMUST00000158554 132 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm8032-201ENSMUST00000171009 574 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Vis1-201ENSMUST00000183957 201 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm43203-201ENSMUST00000200130 558 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm44251-201ENSMUST00000204963 442 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm32526-201ENSMUST00000221878 981 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm24454-201ENSMUST00000083349 132 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Use1Q9CQ56 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Use1Q9CQ56 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms