Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm6419-201ENSMUST00000097166 429 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28bQ8CEG5 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm14115-201ENSMUST00000119242 482 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm16074-201ENSMUST00000119524 444 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm13531-201ENSMUST00000121893 543 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37135-201ENSMUST00000192652 534 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm44494-201ENSMUST00000196760 129 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43222-201ENSMUST00000199013 603 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm9088-201ENSMUST00000220237 508 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 n-R5s156-201ENSMUST00000083377 105 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm25344-201ENSMUST00000104503 132 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm12245-201ENSMUST00000117266 357 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm9506-201ENSMUST00000118516 320 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm15181-201ENSMUST00000120142 177 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm19080-201ENSMUST00000196082 550 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm45185-201ENSMUST00000207556 404 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8523-201ENSMUST00000211386 552 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms