Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm44471-201ENSMUST00000197963 100 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm5288-201ENSMUST00000198323 1119 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm17893-201ENSMUST00000203017 770 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm44048-201ENSMUST00000204531 361 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm17918-201ENSMUST00000205315 574 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm19168-201ENSMUST00000218804 1091 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm3678-201ENSMUST00000218888 492 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 AC156950.1-201ENSMUST00000219604 456 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm30738-201ENSMUST00000221346 502 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 AC122035.2-201ENSMUST00000228698 462 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Mir296-201ENSMUST00000083587 79 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm37984-201ENSMUST00000191641 3733 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Gm42676-201ENSMUST00000197609 2686 ntBASIC12.24□□□□□ -0.45
Trim41Q5NCC3 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm43970-201ENSMUST00000204346 3605 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm42534-201ENSMUST00000196063 1754 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm8734-201ENSMUST00000211669 1312 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC159193.3-201ENSMUST00000221902 2622 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm12193-201ENSMUST00000117250 379 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm11372-201ENSMUST00000117348 570 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm4911-201ENSMUST00000119388 945 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Mup-ps28-201ENSMUST00000120686 289 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm15242-201ENSMUST00000122459 283 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm42581-201ENSMUST00000201774 966 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm5886-202ENSMUST00000203957 522 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm18672-201ENSMUST00000208035 270 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm31166-201ENSMUST00000209326 288 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm3785-201ENSMUST00000221000 202 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 CT030135.1-201ENSMUST00000223760 570 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC107663.1-201ENSMUST00000224257 468 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC132112.1-201ENSMUST00000226354 505 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC154718.1-201ENSMUST00000226676 250 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC107369.1-201ENSMUST00000227373 860 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm10540-201ENSMUST00000097581 276 ntBASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim41Q5NCC3 AC171003.1-201ENSMUST00000221667 1665 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm24534-201ENSMUST00000157949 291 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm22841-201ENSMUST00000158443 62 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms