Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm23662-201ENSMUST00000158046 111 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm22210-201ENSMUST00000158101 144 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm27602-201ENSMUST00000183861 111 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm37203-201ENSMUST00000191618 385 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm24886-201ENSMUST00000104384 123 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm8185-201ENSMUST00000160999 669 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm38181-201ENSMUST00000181357 720 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm8241-201ENSMUST00000189286 816 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm43148-201ENSMUST00000198237 520 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm4742-201ENSMUST00000200261 771 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm9278-201ENSMUST00000205508 553 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm45525-201ENSMUST00000210800 389 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm45734-201ENSMUST00000211916 411 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm7887-201ENSMUST00000056948 537 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Upf3bQ3ULL6 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm5405-201ENSMUST00000120478 609 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm9428-201ENSMUST00000127214 769 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm24719-201ENSMUST00000157520 110 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Gm17511-201ENSMUST00000172206 342 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Mir7220-201ENSMUST00000183978 60 ntBASIC6.05□□□□□ -1.44
Upf3bQ3ULL6 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms