Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Olfr1153-201ENSMUST00000052300 957 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm5341-201ENSMUST00000058881 489 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC8.97□□□□□ -0.97
Col17a1Q07563 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col17a1Q07563 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm42559-201ENSMUST00000201811 3532 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm14679-201ENSMUST00000121536 722 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm25109-201ENSMUST00000122474 114 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm14349-201ENSMUST00000137155 902 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm36986-201ENSMUST00000195320 353 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm37973-201ENSMUST00000195767 1289 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC8.96□□□□□ -0.97
Col17a1Q07563 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm45215-201ENSMUST00000206407 395 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm18924-201ENSMUST00000211929 316 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col17a1Q07563 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.96□□□□□ -0.97
Col17a1Q07563 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC8.96□□□□□ -0.97
Col17a1Q07563 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Col17a1Q07563 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Col17a1Q07563 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm13733-201ENSMUST00000117290 535 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm11774-201ENSMUST00000118601 293 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm7309-201ENSMUST00000121670 581 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm5277-201ENSMUST00000164923 556 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm22119-201ENSMUST00000175594 99 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm28665-201ENSMUST00000189269 670 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Gm2622-201ENSMUST00000200018 471 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col17a1Q07563 CT025525.1-201ENSMUST00000226325 1054 ntBASIC8.96□□□□□ -0.98
Col17a1Q07563 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Col17a1Q07563 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Col17a1Q07563 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm42479-201ENSMUST00000198654 1356 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm24403-201ENSMUST00000104616 130 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm28428-201ENSMUST00000188886 697 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm38046-201ENSMUST00000192733 550 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm37882-201ENSMUST00000195254 196 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm44353-201ENSMUST00000200618 138 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Gm44607-201ENSMUST00000205611 1090 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Col17a1Q07563 CU024910.1-201ENSMUST00000214310 418 ntBASIC8.95□□□□□ -0.98
Col17a1Q07563 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col17a1Q07563 CT009765.2-201ENSMUST00000221331 392 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 114.3 ms