Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Brca1P48754 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.43□□□□□ -1.38
Brca1P48754 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Brca1P48754 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Brca1P48754 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Gm4989-201ENSMUST00000118711 749 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.43□□□□□ -1.38
Brca1P48754 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.43□□□□□ -1.38
Brca1P48754 Gm18618-201ENSMUST00000222211 473 ntBASIC6.43□□□□□ -1.38
Brca1P48754 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Brca1P48754 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Brca1P48754 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Brca1P48754 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.42□□□□□ -1.38
Brca1P48754 Gm26310-201ENSMUST00000157766 117 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Gm33952-201ENSMUST00000197795 408 ntBASIC6.42□□□□□ -1.38
Brca1P48754 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Brca1P48754 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Brca1P48754 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
Brca1P48754 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Brca1P48754 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.42□□□□□ -1.38
Brca1P48754 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Brca1P48754 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm22870-201ENSMUST00000157501 112 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm45405-201ENSMUST00000211544 609 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Gm11975-201ENSMUST00000118772 481 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm27148-201ENSMUST00000185086 160 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Brca1P48754 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.41□□□□□ -1.38
Brca1P48754 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.41□□□□□ -1.38
Brca1P48754 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Brca1P48754 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.41□□□□□ -1.38
Brca1P48754 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Brca1P48754 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms