Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm23233-201ENSMUST00000157301 137 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm25227-201ENSMUST00000158204 112 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm8185-201ENSMUST00000160999 669 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.52□□□□□ -1.53
Cdx2P43241 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm28443-201ENSMUST00000189081 698 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm44456-201ENSMUST00000196554 89 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm2011-203ENSMUST00000203750 435 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm19174-201ENSMUST00000216944 956 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm24029-201ENSMUST00000083928 143 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm23795-201ENSMUST00000084006 137 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdx2P43241 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.52□□□□□ -1.53
Cdx2P43241 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdx2P43241 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdx2P43241 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Cdx2P43241 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Cdx2P43241 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx2P43241 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx2P43241 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Cdx2P43241 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm15766-201ENSMUST00000118025 813 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm6427-201ENSMUST00000118721 979 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm2199-201ENSMUST00000119065 874 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm8358-201ENSMUST00000167222 555 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm8669-201ENSMUST00000183839 945 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm43973-201ENSMUST00000203562 210 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm18850-201ENSMUST00000211578 388 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdx2P43241 Thoc7-209ENSMUST00000225325 765 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm23459-201ENSMUST00000083259 131 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx2P43241 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.51□□□□□ -1.53
Cdx2P43241 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Cdx2P43241 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx2P43241 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx2P43241 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Cdx2P43241 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx2P43241 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx2P43241 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms