Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.82□□□□□ -1.16
Col18a1P39061 AC174780.1-201ENSMUST00000199415 1107 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm44909-201ENSMUST00000208756 165 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm6562-201ENSMUST00000221903 464 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col18a1P39061 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col18a1P39061 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col18a1P39061 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col18a1P39061 Gm20287-201ENSMUST00000172848 2367 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 AC132852.2-201ENSMUST00000216052 2794 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Col18a1P39061 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 AC153940.1-201ENSMUST00000220149 5300 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm24429-201ENSMUST00000104076 132 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm15279-201ENSMUST00000155593 288 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm25430-201ENSMUST00000157614 289 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm43779-201ENSMUST00000196691 829 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm43018-201ENSMUST00000198075 1275 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Col18a1P39061 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC7.82□□□□□ -1.16
Col18a1P39061 Gm19936-201ENSMUST00000216414 838 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm18594-201ENSMUST00000175733 1403 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm37217-201ENSMUST00000194017 3521 ntBASIC7.82□□□□□ -1.16
Col18a1P39061 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Col18a1P39061 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col18a1P39061 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 AC122382.2-201ENSMUST00000225128 3602 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 Gm37648-201ENSMUST00000192072 2563 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 Gm38118-201ENSMUST00000192052 2222 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col18a1P39061 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col18a1P39061 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col18a1P39061 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC7.81□□□□□ -1.16
Col18a1P39061 Gm6680-201ENSMUST00000192789 950 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Gm44181-201ENSMUST00000203106 483 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC7.81□□□□□ -1.16
Col18a1P39061 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC7.81□□□□□ -1.16
Col18a1P39061 AC157017.2-201ENSMUST00000218354 777 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 AC153526.1-201ENSMUST00000219750 190 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col18a1P39061 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Col18a1P39061 Gm23795-201ENSMUST00000084006 137 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Gm6818-201ENSMUST00000190556 2558 ntBASIC7.81□□□□□ -1.16
Col18a1P39061 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col18a1P39061 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.81□□□□□ -1.16
Col18a1P39061 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm13491-201ENSMUST00000118267 235 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm11972-201ENSMUST00000118514 389 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm11826-201ENSMUST00000118781 438 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm12825-201ENSMUST00000120249 563 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
Col18a1P39061 Clec2j-202ENSMUST00000203658 606 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm18414-201ENSMUST00000210858 694 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col18a1P39061 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm7887-201ENSMUST00000056948 537 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Gm2531-201ENSMUST00000075609 512 ntBASIC7.8□□□□□ -1.16
Col18a1P39061 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Col18a1P39061 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC7.8□□□□□ -1.16
Col18a1P39061 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Col18a1P39061 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms