Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC4.79□□□□□ -1.64
Cdx1P18111 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm11799-201ENSMUST00000116110 460 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm12937-201ENSMUST00000118333 448 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm25374-201ENSMUST00000158158 101 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm23115-201ENSMUST00000158480 108 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm22254-201ENSMUST00000179186 110 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm36998-201ENSMUST00000193205 704 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm43383-201ENSMUST00000195981 469 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm32158-201ENSMUST00000200135 404 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm4083-201ENSMUST00000207158 451 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm32983-201ENSMUST00000208500 505 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm45485-201ENSMUST00000211229 357 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm5055-201ENSMUST00000215697 581 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Gm8672-201ENSMUST00000221200 332 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.79□□□□□ -1.64
Cdx1P18111 AC158750.1-201ENSMUST00000226163 634 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 AC154757.2-201ENSMUST00000228885 743 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdx1P18111 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm21731-201ENSMUST00000079524 489 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Cdx1P18111 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Cdx1P18111 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Cdx1P18111 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC4.79□□□□□ -1.64
Cdx1P18111 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Cdx1P18111 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Cdx1P18111 AC117608.2-201ENSMUST00000224124 1363 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Gm44045-201ENSMUST00000204906 2520 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx1P18111 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Cdx1P18111 n-R5s178-201ENSMUST00000104249 114 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm26422-201ENSMUST00000104276 132 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Cdx1P18111 Gm14513-201ENSMUST00000117403 123 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm13265-201ENSMUST00000118090 421 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm13835-201ENSMUST00000118459 685 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm9005-201ENSMUST00000119908 607 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm14925-201ENSMUST00000120611 438 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm14038-201ENSMUST00000121500 807 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm6977-201ENSMUST00000121568 512 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Cdx1P18111 Gm4997-201ENSMUST00000154056 360 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm25387-201ENSMUST00000157813 132 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Mir1945-201ENSMUST00000157919 78 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm24343-201ENSMUST00000158708 111 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm22326-201ENSMUST00000158897 351 ntBASIC4.78□□□□□ -1.64
Cdx1P18111 Gm8837-201ENSMUST00000161037 1107 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms