Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Mir143-201ENSMUST00000083511 63 ntBASIC6.19□□□□□ -1.42
Chmp6P0C0A3 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Chmp6P0C0A3 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Zfp389-201ENSMUST00000118425 675 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm9428-201ENSMUST00000127214 769 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm23662-201ENSMUST00000158046 111 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm22724-201ENSMUST00000158091 127 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm25445-201ENSMUST00000158996 299 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Mir7220-201ENSMUST00000183978 60 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm43467-201ENSMUST00000197441 437 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm44432-201ENSMUST00000203342 938 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm4032-201ENSMUST00000210886 487 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm46223-201ENSMUST00000215196 675 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm18591-201ENSMUST00000220568 763 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm7042-201ENSMUST00000223027 384 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm23686-201ENSMUST00000083241 164 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm24029-201ENSMUST00000083928 143 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.18□□□□□ -1.42
Chmp6P0C0A3 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm13013-201ENSMUST00000119087 523 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm15801-201ENSMUST00000120920 522 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms