Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm45405-201ENSMUST00000211544 609 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm45733-201ENSMUST00000212988 437 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Cma2-202ENSMUST00000228263 857 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Mir546-201ENSMUST00000102105 121 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm8545-201ENSMUST00000120692 801 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm11679-201ENSMUST00000121830 779 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm16531-201ENSMUST00000180658 967 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm26970-201ENSMUST00000182990 964 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm6693-201ENSMUST00000189583 813 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm6074-201ENSMUST00000193340 451 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm412-201ENSMUST00000193360 948 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm7890-201ENSMUST00000204877 601 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm19880-201ENSMUST00000207731 318 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H2afb2S4R1M3 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H2afb2S4R1M3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Mir711-201ENSMUST00000102188 82 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm23839-201ENSMUST00000116957 109 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm13473-201ENSMUST00000119289 367 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm7079-201ENSMUST00000119726 171 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm23233-201ENSMUST00000157301 137 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm8185-201ENSMUST00000160999 669 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm20530-201ENSMUST00000174261 254 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm6223-201ENSMUST00000178436 871 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm27006-201ENSMUST00000182218 943 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm27679-201ENSMUST00000184612 84 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Mir6989-201ENSMUST00000184812 65 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm27653-201ENSMUST00000185037 136 ntBASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.64□□□□□ -1.51
H2afb2S4R1M3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms