Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mir7j-201ENSMUST00000184427 122 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm29214-201ENSMUST00000190216 570 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm7463-201ENSMUST00000201541 547 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm35619-201ENSMUST00000222548 600 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm28392-201ENSMUST00000077630 393 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Trim11Q99PQ2 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm11984-201ENSMUST00000118142 766 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm12135-201ENSMUST00000119170 466 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm12639-201ENSMUST00000121400 493 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm11385-201ENSMUST00000121513 570 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm23077-201ENSMUST00000157854 116 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm26355-201ENSMUST00000158220 105 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm24680-201ENSMUST00000158759 126 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm22533-201ENSMUST00000158821 274 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm23810-201ENSMUST00000175150 74 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm8609-201ENSMUST00000182967 998 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm27360-201ENSMUST00000183487 80 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm28114-201ENSMUST00000187232 379 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm29160-201ENSMUST00000190094 699 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm38221-201ENSMUST00000195146 365 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm34144-201ENSMUST00000197039 259 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm43089-201ENSMUST00000199162 275 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm42824-201ENSMUST00000199361 247 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm33626-201ENSMUST00000206790 828 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm2544-201ENSMUST00000222702 756 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim11Q99PQ2 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim11Q99PQ2 AC154323.3-201ENSMUST00000226927 1660 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms