Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24687-201ENSMUST00000157758 241 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm22523-201ENSMUST00000158696 100 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm20620-201ENSMUST00000177528 168 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm25244-201ENSMUST00000178089 132 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm27861-201ENSMUST00000183920 214 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm28527-201ENSMUST00000185210 297 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm6261-201ENSMUST00000204707 760 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm5055-201ENSMUST00000215697 581 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Olfr790-204ENSMUST00000218901 1070 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm21731-201ENSMUST00000079524 489 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Clp1Q99LI9 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.28□□□□□ -1.24
Clp1Q99LI9 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Clp1Q99LI9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Clp1Q99LI9 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Clp1Q99LI9 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm12874-201ENSMUST00000117190 913 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm14733-201ENSMUST00000117680 133 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm14899-201ENSMUST00000118673 548 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm15149-201ENSMUST00000119370 360 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm7485-201ENSMUST00000119502 1109 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm12654-201ENSMUST00000120387 587 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm11344-201ENSMUST00000122011 335 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm12045-201ENSMUST00000122122 573 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Ear-ps7-201ENSMUST00000161287 442 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm17177-201ENSMUST00000169144 483 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm23379-201ENSMUST00000180026 107 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm26557-201ENSMUST00000180756 493 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm8151-201ENSMUST00000184817 871 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm29550-201ENSMUST00000185543 285 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm20885-201ENSMUST00000190192 654 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm29740-201ENSMUST00000193182 655 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm36866-201ENSMUST00000193343 657 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm36047-201ENSMUST00000193659 657 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm37758-201ENSMUST00000194275 629 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm20857-201ENSMUST00000194766 657 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm20858-201ENSMUST00000195459 657 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm43555-201ENSMUST00000196588 310 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 AC154257.2-201ENSMUST00000224166 340 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm26442-201ENSMUST00000082588 153 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm43843-201ENSMUST00000202396 1587 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm45415-201ENSMUST00000209644 2074 ntBASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Clp1Q99LI9 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms