Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm15877-201ENSMUST00000121897 964 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm12293-201ENSMUST00000121898 590 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm26106-201ENSMUST00000157254 228 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Mirt2-201ENSMUST00000175179 285 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm17048-201ENSMUST00000179266 847 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm21542-201ENSMUST00000182307 993 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm17952-201ENSMUST00000193914 747 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm44892-201ENSMUST00000208595 488 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm19186-201ENSMUST00000219922 333 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm23737-201ENSMUST00000082547 159 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm11447-201ENSMUST00000118983 858 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm14115-201ENSMUST00000119242 482 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm15596-201ENSMUST00000121139 784 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm6223-201ENSMUST00000178436 871 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm43148-201ENSMUST00000198237 520 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm42428-201ENSMUST00000198677 302 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm43762-201ENSMUST00000201521 295 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm24454-201ENSMUST00000083349 132 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.51□□□□□ -1.53
Lsm1Q8VC85 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm7146-201ENSMUST00000116079 739 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm11971-201ENSMUST00000117715 288 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm12653-201ENSMUST00000117778 561 ntBASIC5.5□□□□□ -1.53
Lsm1Q8VC85 Gm11212-201ENSMUST00000118337 618 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms