Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
CopaQ8CIE6 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
CopaQ8CIE6 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CopaQ8CIE6 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.22□□□□□ -1.41
CopaQ8CIE6 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CopaQ8CIE6 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CopaQ8CIE6 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CopaQ8CIE6 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.22□□□□□ -1.41
CopaQ8CIE6 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CopaQ8CIE6 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
CopaQ8CIE6 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.21□□□□□ -1.41
CopaQ8CIE6 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.21□□□□□ -1.41
CopaQ8CIE6 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CopaQ8CIE6 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm15161-201ENSMUST00000117340 387 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm15901-201ENSMUST00000117663 941 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm14173-201ENSMUST00000117690 278 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm12465-201ENSMUST00000118591 300 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm8855-201ENSMUST00000118888 878 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm11617-201ENSMUST00000119609 639 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm4914-201ENSMUST00000119757 459 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm13214-201ENSMUST00000122137 408 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm17121-201ENSMUST00000170414 847 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm16456-201ENSMUST00000174431 920 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm17222-201ENSMUST00000180135 847 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm44319-201ENSMUST00000196974 93 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm18467-201ENSMUST00000208805 434 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm45878-201ENSMUST00000211839 241 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm22126-201ENSMUST00000083244 142 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm10221-201ENSMUST00000088299 309 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CopaQ8CIE6 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.21□□□□□ -1.42
CopaQ8CIE6 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm14382-201ENSMUST00000117374 437 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm14356-201ENSMUST00000118322 869 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm15719-201ENSMUST00000120619 635 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm25048-201ENSMUST00000158598 91 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms