Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup88Q8CEC0 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Nup88Q8CEC0 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm23279-201ENSMUST00000157912 97 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm24731-201ENSMUST00000158227 131 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm16112-201ENSMUST00000159075 382 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm6808-201ENSMUST00000162341 807 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm43222-201ENSMUST00000199013 603 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm8930-201ENSMUST00000201693 768 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm26063-201ENSMUST00000083378 107 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.77□□□□□ -1.33
Nup88Q8CEC0 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Nup88Q8CEC0 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm13770-201ENSMUST00000117149 305 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm12901-201ENSMUST00000118690 532 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm14783-201ENSMUST00000118900 663 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm15400-201ENSMUST00000118944 601 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm12768-201ENSMUST00000120055 759 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Mir1903-201ENSMUST00000122574 80 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm23669-201ENSMUST00000157470 128 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm1972-201ENSMUST00000181606 964 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm3605-201ENSMUST00000185858 440 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm29124-201ENSMUST00000186576 452 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm28883-201ENSMUST00000189256 369 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm37196-201ENSMUST00000194762 906 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm7890-201ENSMUST00000204877 601 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 LOC665443-201ENSMUST00000212284 796 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm6104-201ENSMUST00000078030 603 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms