Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC9□□□□□ -0.97
Col17a1Q07563 Gm20239-201ENSMUST00000196610 982 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Gm9038-201ENSMUST00000203400 604 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Gm18689-201ENSMUST00000203969 902 ntBASIC9□□□□□ -0.97
Col17a1Q07563 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC9□□□□□ -0.97
Col17a1Q07563 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC9□□□□□ -0.97
Col17a1Q07563 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Col17a1Q07563 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC9□□□□□ -0.97
Col17a1Q07563 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Col17a1Q07563 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.99□□□□□ -0.97
Col17a1Q07563 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm11826-201ENSMUST00000118781 438 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm12001-201ENSMUST00000121727 913 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm3531-201ENSMUST00000162698 489 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm7316-201ENSMUST00000165395 445 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm44548-201ENSMUST00000208929 192 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Col17a1Q07563 n-R5s180-201ENSMUST00000082770 106 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm9877-201ENSMUST00000064271 2627 ntBASIC8.99□□□□□ -0.97
Col17a1Q07563 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Col17a1Q07563 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.99□□□□□ -0.97
Col17a1Q07563 Gm16270-201ENSMUST00000160327 3238 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm42528-201ENSMUST00000200697 3418 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm12732-201ENSMUST00000121688 180 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm15812-201ENSMUST00000162331 748 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm20480-201ENSMUST00000173953 250 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm28615-201ENSMUST00000187527 482 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm29111-201ENSMUST00000188823 696 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm28584-201ENSMUST00000191489 696 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm38138-201ENSMUST00000193274 696 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm37991-201ENSMUST00000194297 696 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm44213-201ENSMUST00000204977 703 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 AC132433.1-201ENSMUST00000221553 1101 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Col17a1Q07563 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm13928-201ENSMUST00000120326 1732 ntBASIC8.98□□□□□ -0.97
Col17a1Q07563 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Col17a1Q07563 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.97□□□□□ -0.97
Col17a1Q07563 AC110043.1-201ENSMUST00000220278 1627 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm15238-201ENSMUST00000119938 1296 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm25430-201ENSMUST00000157614 289 ntBASIC8.97□□□□□ -0.97
Col17a1Q07563 Gm19002-201ENSMUST00000192649 1012 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms