Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PrkdcP97313 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PrkdcP97313 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm45767-201ENSMUST00000212778 4561 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PrkdcP97313 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm26069-201ENSMUST00000157497 277 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.78□□□□□ -1.8
PrkdcP97313 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm7990-201ENSMUST00000212126 593 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm18601-201ENSMUST00000220831 634 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PrkdcP97313 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 AC158982.1-205ENSMUST00000227339 1876 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm12189-201ENSMUST00000119779 912 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm18128-201ENSMUST00000172625 511 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm20701-201ENSMUST00000176082 347 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm3912-203ENSMUST00000211024 367 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC3.78□□□□□ -1.8
PrkdcP97313 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC3.78□□□□□ -1.8
PrkdcP97313 Anxa13-202ENSMUST00000227274 1201 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PrkdcP97313 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PrkdcP97313 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm19880-201ENSMUST00000207731 318 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 CT030238.1-201ENSMUST00000228393 442 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Gm45358-201ENSMUST00000209492 2305 ntBASIC3.78□□□□□ -1.8
PrkdcP97313 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PrkdcP97313 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PrkdcP97313 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
PrkdcP97313 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC3.77□□□□□ -1.81
PrkdcP97313 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm7840-201ENSMUST00000122086 533 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.77□□□□□ -1.81
PrkdcP97313 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm16114-201ENSMUST00000161930 300 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PrkdcP97313 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.77□□□□□ -1.81
PrkdcP97313 Gm8861-201ENSMUST00000196346 832 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms