Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.27□□□□□ -1.41
NcanP55066 AC121986.1-201ENSMUST00000218588 781 ntBASIC6.27□□□□□ -1.41
NcanP55066 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.27□□□□□ -1.41
NcanP55066 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
NcanP55066 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
NcanP55066 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NcanP55066 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NcanP55066 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NcanP55066 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NcanP55066 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.27□□□□□ -1.41
NcanP55066 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NcanP55066 Gm14667-201ENSMUST00000119448 1350 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NcanP55066 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.27□□□□□ -1.41
NcanP55066 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.26□□□□□ -1.41
NcanP55066 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.26□□□□□ -1.41
NcanP55066 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Gm15660-201ENSMUST00000118997 478 ntBASIC6.26□□□□□ -1.41
NcanP55066 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.26□□□□□ -1.41
NcanP55066 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
NcanP55066 Gm14603-201ENSMUST00000121275 448 ntBASIC6.26□□□□□ -1.41
NcanP55066 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Mir6337-201ENSMUST00000184194 105 ntBASIC6.26□□□□□ -1.41
NcanP55066 Gm28066-201ENSMUST00000188657 472 ntBASIC6.26□□□□□ -1.41
NcanP55066 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.26□□□□□ -1.41
NcanP55066 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.26□□□□□ -1.41
NcanP55066 Gm44316-201ENSMUST00000199274 97 ntBASIC6.26□□□□□ -1.41
NcanP55066 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Gm44225-201ENSMUST00000203582 186 ntBASIC6.26□□□□□ -1.41
NcanP55066 Gm19174-201ENSMUST00000216944 956 ntBASIC6.26□□□□□ -1.41
NcanP55066 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
NcanP55066 AC074315.1-201ENSMUST00000228801 214 ntBASIC6.26□□□□□ -1.41
NcanP55066 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Snord15b-201ENSMUST00000083032 145 ntBASIC6.26□□□□□ -1.41
NcanP55066 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
NcanP55066 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.26□□□□□ -1.41
NcanP55066 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.26□□□□□ -1.41
NcanP55066 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.26□□□□□ -1.41
NcanP55066 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NcanP55066 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.26□□□□□ -1.41
NcanP55066 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
NcanP55066 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NcanP55066 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NcanP55066 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NcanP55066 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NcanP55066 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
NcanP55066 Gm11447-201ENSMUST00000118983 858 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm14563-201ENSMUST00000120571 354 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm12488-201ENSMUST00000122449 499 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm15501-202ENSMUST00000140687 625 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm8185-201ENSMUST00000160999 669 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm9006-201ENSMUST00000165520 841 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm17511-201ENSMUST00000172206 342 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.25□□□□□ -1.41
NcanP55066 Gm37908-201ENSMUST00000195828 470 ntBASIC6.25□□□□□ -1.41
NcanP55066 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.25□□□□□ -1.41
NcanP55066 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.25□□□□□ -1.41
NcanP55066 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NcanP55066 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.25□□□□□ -1.41
NcanP55066 Gm5318-201ENSMUST00000205249 406 ntBASIC6.25□□□□□ -1.41
NcanP55066 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.25□□□□□ -1.41
NcanP55066 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms