Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sox6P40645 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.39□□□□□ -1.55
Sox6P40645 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.39□□□□□ -1.55
Sox6P40645 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox6P40645 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm7146-201ENSMUST00000116079 739 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm14267-201ENSMUST00000119751 496 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.38□□□□□ -1.55
Sox6P40645 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm23995-201ENSMUST00000158060 129 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm25013-201ENSMUST00000158402 128 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm21999-201ENSMUST00000165985 387 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm25065-201ENSMUST00000177914 132 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm25891-201ENSMUST00000180050 132 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm3605-201ENSMUST00000185858 440 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm8581-201ENSMUST00000188636 890 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.38□□□□□ -1.55
Sox6P40645 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm44134-202ENSMUST00000204777 545 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm44251-201ENSMUST00000204963 442 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm6562-201ENSMUST00000221903 464 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Gm23624-201ENSMUST00000082463 321 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.38□□□□□ -1.55
Sox6P40645 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sox6P40645 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.38□□□□□ -1.55
Sox6P40645 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Sox6P40645 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sox6P40645 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.38□□□□□ -1.55
Sox6P40645 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Sox6P40645 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Sox6P40645 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Sox6P40645 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm22374-201ENSMUST00000104583 132 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm13578-201ENSMUST00000120849 590 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm12890-201ENSMUST00000120885 373 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm12396-201ENSMUST00000121600 306 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm13214-201ENSMUST00000122137 408 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm14970-201ENSMUST00000122289 355 ntBASIC5.37□□□□□ -1.55
Sox6P40645 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm12833-201ENSMUST00000136112 477 ntBASIC5.37□□□□□ -1.55
Sox6P40645 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.37□□□□□ -1.55
Sox6P40645 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.37□□□□□ -1.55
Sox6P40645 Gm23896-201ENSMUST00000158109 130 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Scarna10-201ENSMUST00000158992 325 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm20453-201ENSMUST00000173968 226 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm27512-201ENSMUST00000175328 126 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm3650-201ENSMUST00000180600 747 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Mir6992-201ENSMUST00000183342 109 ntBASIC5.37□□□□□ -1.55
Sox6P40645 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Sox6P40645 Gm5734-201ENSMUST00000189787 913 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms