Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cxcl12P40224 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Cxcl12P40224 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.98□□□□□ -1.45
Cxcl12P40224 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm22710-201ENSMUST00000116892 125 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm6427-201ENSMUST00000118721 979 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm15171-201ENSMUST00000122191 334 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm11507-201ENSMUST00000156462 412 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm27820-201ENSMUST00000183628 175 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Cxcl12P40224 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.98□□□□□ -1.45
Cxcl12P40224 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.98□□□□□ -1.45
Cxcl12P40224 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Cxcl12P40224 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cxcl12P40224 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.98□□□□□ -1.45
Cxcl12P40224 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Cxcl12P40224 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm15741-201ENSMUST00000119401 754 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm25271-201ENSMUST00000157273 290 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm8185-201ENSMUST00000160999 669 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm26950-201ENSMUST00000182734 498 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm38291-201ENSMUST00000193671 259 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cxcl12P40224 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm4963-201ENSMUST00000072718 378 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cxcl12P40224 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cxcl12P40224 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.97□□□□□ -1.45
Cxcl12P40224 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cxcl12P40224 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.96□□□□□ -1.45
Cxcl12P40224 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cxcl12P40224 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Cxcl12P40224 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Cxcl12P40224 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
Cxcl12P40224 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.96□□□□□ -1.46
Cxcl12P40224 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cxcl12P40224 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cxcl12P40224 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm14158-201ENSMUST00000118409 308 ntBASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm14485-201ENSMUST00000119489 493 ntBASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm4234-201ENSMUST00000119747 714 ntBASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.96□□□□□ -1.46
Cxcl12P40224 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.96□□□□□ -1.46
Cxcl12P40224 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms