Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.06□□□□□ -1.44
TnfP06804 Gm19174-201ENSMUST00000216944 956 ntBASIC6.06□□□□□ -1.44
TnfP06804 Gm8290-201ENSMUST00000218202 477 ntBASIC6.06□□□□□ -1.44
TnfP06804 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.06□□□□□ -1.44
TnfP06804 Gm7887-201ENSMUST00000056948 537 ntBASIC6.06□□□□□ -1.44
TnfP06804 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
TnfP06804 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TnfP06804 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TnfP06804 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TnfP06804 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.05□□□□□ -1.44
TnfP06804 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.05□□□□□ -1.44
TnfP06804 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TnfP06804 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm24230-201ENSMUST00000104313 129 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm15741-201ENSMUST00000119401 754 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.05□□□□□ -1.44
TnfP06804 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.05□□□□□ -1.44
TnfP06804 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.05□□□□□ -1.44
TnfP06804 Gm24236-201ENSMUST00000157794 134 ntBASIC6.05□□□□□ -1.44
TnfP06804 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm20549-201ENSMUST00000174804 429 ntBASIC6.05□□□□□ -1.44
TnfP06804 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Mir7020-201ENSMUST00000183787 70 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm29376-201ENSMUST00000189357 835 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm37681-201ENSMUST00000193880 727 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.05□□□□□ -1.44
TnfP06804 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.05□□□□□ -1.44
TnfP06804 Gm4012-201ENSMUST00000221504 581 ntBASIC6.05□□□□□ -1.44
TnfP06804 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TnfP06804 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.05□□□□□ -1.44
TnfP06804 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TnfP06804 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.05□□□□□ -1.44
TnfP06804 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TnfP06804 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TnfP06804 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.04□□□□□ -1.44
TnfP06804 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.04□□□□□ -1.44
TnfP06804 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.04□□□□□ -1.44
TnfP06804 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
TnfP06804 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.04□□□□□ -1.44
TnfP06804 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.04□□□□□ -1.44
TnfP06804 Gm11481-201ENSMUST00000120069 255 ntBASIC6.04□□□□□ -1.44
TnfP06804 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Gm26172-201ENSMUST00000158421 134 ntBASIC6.04□□□□□ -1.44
TnfP06804 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Gm3216-201ENSMUST00000166927 486 ntBASIC6.04□□□□□ -1.44
TnfP06804 Gm3141-201ENSMUST00000168726 499 ntBASIC6.04□□□□□ -1.44
TnfP06804 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Gm8826-201ENSMUST00000193161 948 ntBASIC6.04□□□□□ -1.44
TnfP06804 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.04□□□□□ -1.44
TnfP06804 Gm43078-201ENSMUST00000197222 168 ntBASIC6.04□□□□□ -1.44
TnfP06804 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.04□□□□□ -1.44
TnfP06804 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TnfP06804 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.04□□□□□ -1.44
TnfP06804 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TnfP06804 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.04□□□□□ -1.44
TnfP06804 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TnfP06804 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.04□□□□□ -1.44
TnfP06804 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TnfP06804 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TnfP06804 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.04□□□□□ -1.44
TnfP06804 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms