Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm7887-201ENSMUST00000056948 537 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
H2afb2S4R1M3 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm8761-201ENSMUST00000121507 955 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm21654-201ENSMUST00000188086 691 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm38185-201ENSMUST00000193195 694 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm31861-201ENSMUST00000204563 672 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm45870-201ENSMUST00000211269 601 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H2afb2S4R1M3 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm6427-201ENSMUST00000118721 979 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm5405-201ENSMUST00000120478 609 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm26170-201ENSMUST00000158419 148 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm24300-201ENSMUST00000177809 109 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm24017-201ENSMUST00000178726 109 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm23952-201ENSMUST00000179380 109 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm37024-201ENSMUST00000192224 868 ntBASIC5.66□□□□□ -1.5
H2afb2S4R1M3 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms